TPDB

3D PDB MODEL

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TPDB ID TPDB59457

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 15-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SQDITSGMWFGPRLZ

FASTA

>TPDB59457|Neuropeptide|length=15
SQDITSGMWFGPRLZ

Formula C71H107N19O21S1

Absent Amino Acids ANCEHKYV

Common Amino Acids GS

Mass 1594.81

PI 6.78

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 5

Net Charge -0

Boman Index -0.59

Hydrophobicity -0.273

Aliphatic Index 52.00

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 344.87

Polar Residues 4

number

0

A

1

R

0

N

1

D

0

C

0

E

1

Q

2

G

0

H

1

I

1

L

0

K

1

M

1

F

1

P

2

S

1

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 1 C: 0 E: 0 Q: 1 G: 2 H: 0 I: 1 L: 1 K: 0 M: 1 F: 1 P: 1 S: 2 T: 1 W: 1 Y: 0 V: 0

Length

15

Formula

C71H107N19O21S1

Mass

1594.81

PI

6.78

Net Charge

-0

Boman Index

-0.59

Hydrophobicity

-0.273

Evidence 1 Activity

Source & Reference

Database Source NA