TPDB

3D PDB MODEL

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TPDB ID TPDB59054

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 50-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SKNSGNQTRRQGCSLGTCIVHDLAHRLHQLGNKYKFGNAPEDKMSPQGYZ

FASTA

>TPDB59054|Neuropeptide|length=50
SKNSGNQTRRQGCSLGTCIVHDLAHRLHQLGNKYKFGNAPEDKMSPQGYZ

Formula C230H366N76O72S3

Absent Amino Acids W

Common Amino Acids G

Mass 5444.08

PI 9.84

Basic Residues 10

Acidic Residues 3

Hydrophobic Residues 12

Net Charge +4

Boman Index 12.97

Hydrophobicity -1.056

Aliphatic Index 48.80

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3105

Absorbance 280nm 57.03

Polar Residues 18

number

2

A

3

R

4

N

2

D

2

C

1

E

4

Q

6

G

3

H

1

I

4

L

4

K

1

M

1

F

2

P

4

S

2

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 2 R: 3 N: 4 D: 2 C: 2 E: 1 Q: 4 G: 6 H: 3 I: 1 L: 4 K: 4 M: 1 F: 1 P: 2 S: 4 T: 2 W: 0 Y: 2 V: 1

Length

50

Formula

C230H366N76O72S3

Mass

5444.08

PI

9.84

Net Charge

+4

Boman Index

12.97

Hydrophobicity

-1.056

Evidence 1 Activity

Source & Reference

Database Source NA