TPDB

3D PDB MODEL

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TPDB ID TPDB59001

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 32-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SIPNSDETSGGGSKIVEISPRPDRFYLGSRYZ

FASTA

>TPDB59001|Neuropeptide|length=32
SIPNSDETSGGGSKIVEISPRPDRFYLGSRYZ

Formula C147H230N42O50

Absent Amino Acids ACQHMW

Common Amino Acids S

Mass 3385.69

PI 7.05

Basic Residues 4

Acidic Residues 4

Hydrophobic Residues 8

Net Charge +0

Boman Index 8.22

Hydrophobicity -0.784

Aliphatic Index 57.81

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 88.02

Polar Residues 10

number

0

A

3

R

1

N

2

D

0

C

2

E

0

Q

4

G

0

H

3

I

1

L

1

K

0

M

1

F

3

P

6

S

1

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 0 R: 3 N: 1 D: 2 C: 0 E: 2 Q: 0 G: 4 H: 0 I: 3 L: 1 K: 1 M: 0 F: 1 P: 3 S: 6 T: 1 W: 0 Y: 2 V: 1

Length

32

Formula

C147H230N42O50

Mass

3385.69

PI

7.05

Net Charge

+0

Boman Index

8.22

Hydrophobicity

-0.784

Evidence 1 Activity

Source & Reference

Database Source NA