TPDB

3D PDB MODEL

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TPDB ID TPDB58996

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 27-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SINTDGPGLSHMKGDDDDEGPFWATRZ

FASTA

>TPDB58996|Neuropeptide|length=27
SINTDGPGLSHMKGDDDDEGPFWATRZ

Formula C119H176N34O44S1

Absent Amino Acids CQYV

Common Amino Acids D

Mass 2818.97

PI 3.93

Basic Residues 3

Acidic Residues 6

Hydrophobic Residues 6

Net Charge -4

Boman Index 8.58

Hydrophobicity -1.111

Aliphatic Index 32.59

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 195.11

Polar Residues 5

number

1

A

1

R

1

N

5

D

0

C

1

E

0

Q

4

G

1

H

1

I

1

L

1

K

1

M

1

F

2

P

2

S

2

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 5 C: 0 E: 1 Q: 0 G: 4 H: 1 I: 1 L: 1 K: 1 M: 1 F: 1 P: 2 S: 2 T: 2 W: 1 Y: 0 V: 0

Length

27

Formula

C119H176N34O44S1

Mass

2818.97

PI

3.93

Net Charge

-4

Boman Index

8.58

Hydrophobicity

-1.111

Evidence 1 Activity

Source & Reference

Database Source NA