TPDB

3D PDB MODEL

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TPDB ID TPDB58660

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 20-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SENKEDANTMSATWFGPRYZ

FASTA

>TPDB58660|Neuropeptide|length=20
SENKEDANTMSATWFGPRYZ

Formula C95H138N26O33S1

Absent Amino Acids CQHILV

Common Amino Acids ANEST

Mass 2204.36

PI 4.44

Basic Residues 2

Acidic Residues 3

Hydrophobic Residues 6

Net Charge -1

Boman Index 4.42

Hydrophobicity -1.240

Aliphatic Index 10.00

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 317.10

Polar Residues 7

number

2

A

1

R

2

N

1

D

0

C

2

E

0

Q

1

G

0

H

0

I

0

L

1

K

1

M

1

F

1

P

2

S

2

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 2 R: 1 N: 2 D: 1 C: 0 E: 2 Q: 0 G: 1 H: 0 I: 0 L: 0 K: 1 M: 1 F: 1 P: 1 S: 2 T: 2 W: 1 Y: 1 V: 0

Length

20

Formula

C95H138N26O33S1

Mass

2204.36

PI

4.44

Net Charge

-1

Boman Index

4.42

Hydrophobicity

-1.240

Evidence 1 Activity

Source & Reference

Database Source NA