TPDB

3D PDB MODEL

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TPDB ID TPDB58576

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 15-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SDPEVPGMWFGPRLZ

FASTA

>TPDB58576|Neuropeptide|length=15
SDPEVPGMWFGPRLZ

Formula C73H106N18O20S1

Absent Amino Acids ANCQHIKTY

Common Amino Acids P

Mass 1587.81

PI 4.07

Basic Residues 1

Acidic Residues 2

Hydrophobic Residues 5

Net Charge -1

Boman Index 1.86

Hydrophobicity -0.407

Aliphatic Index 45.33

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 346.39

Polar Residues 1

number

0

A

1

R

0

N

1

D

0

C

1

E

0

Q

2

G

0

H

0

I

1

L

0

K

1

M

1

F

3

P

1

S

0

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 2 H: 0 I: 0 L: 1 K: 0 M: 1 F: 1 P: 3 S: 1 T: 0 W: 1 Y: 0 V: 1

Length

15

Formula

C73H106N18O20S1

Mass

1587.81

PI

4.07

Net Charge

-1

Boman Index

1.86

Hydrophobicity

-0.407

Evidence 1 Activity

Source & Reference

Database Source NA