TPDB

3D PDB MODEL

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TPDB ID TPDB58493

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 37-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SAWSDPCRLNLGGRCATEIASDLVKAWHYLNSSNSPZ

FASTA

>TPDB58493|Neuropeptide|length=37
SAWSDPCRLNLGGRCATEIASDLVKAWHYLNSSNSPZ

Formula C169H260N50O54S2

Absent Amino Acids QMF

Common Amino Acids S

Mass 3920.35

PI 7.00

Basic Residues 4

Acidic Residues 3

Hydrophobic Residues 13

Net Charge +0

Boman Index 2.87

Hydrophobicity -0.368

Aliphatic Index 71.35

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12615

Absorbance 280nm 321.78

Polar Residues 13

number

4

A

2

R

3

N

2

D

2

C

1

E

0

Q

2

G

1

H

1

I

4

L

1

K

0

M

0

F

2

P

6

S

1

T

2

W

1

Y

1

V

Amino Acid Distribution

A: 4 R: 2 N: 3 D: 2 C: 2 E: 1 Q: 0 G: 2 H: 1 I: 1 L: 4 K: 1 M: 0 F: 0 P: 2 S: 6 T: 1 W: 2 Y: 1 V: 1

Length

37

Formula

C169H260N50O54S2

Mass

3920.35

PI

7.00

Net Charge

+0

Boman Index

2.87

Hydrophobicity

-0.368

Evidence 1 Activity

Source & Reference

Database Source NA