TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB58212

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 43-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

RPRHLDNTGIETRAEGEGEMQDALKYLEELDKYYSQVARPRFZ

FASTA

>TPDB58212|Neuropeptide|length=43
RPRHLDNTGIETRAEGEGEMQDALKYLEELDKYYSQVARPRFZ

Formula C216H338N64O70S1

Absent Amino Acids CW

Common Amino Acids E

Mass 4983.51

PI 5.01

Basic Residues 8

Acidic Residues 9

Hydrophobic Residues 14

Net Charge -2

Boman Index 18.55

Hydrophobicity -1.209

Aliphatic Index 59.07

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 4470

Absorbance 280nm 89.70

Polar Residues 9

number

3

A

5

R

1

N

3

D

0

C

6

E

2

Q

3

G

1

H

1

I

4

L

2

K

1

M

1

F

2

P

1

S

2

T

0

W

3

Y

1

V

Amino Acid Distribution

A: 3 R: 5 N: 1 D: 3 C: 0 E: 6 Q: 2 G: 3 H: 1 I: 1 L: 4 K: 2 M: 1 F: 1 P: 2 S: 1 T: 2 W: 0 Y: 3 V: 1

Length

43

Formula

C216H338N64O70S1

Mass

4983.51

PI

5.01

Net Charge

-2

Boman Index

18.55

Hydrophobicity

-1.209

Evidence 1 Activity

Source & Reference

Database Source NA