TPDB

3D PDB MODEL

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TPDB ID TPDB58052

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 89-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

RDVSTSQAVLPDDFPRYPVGKFFKFDTWRQSAGRLRRGLPALLRARRGRMLAKELEAFREAKRHRPLIVLPPKDPAHGGASSEMSSNHQ

FASTA

>TPDB58052|Neuropeptide|length=89
RDVSTSQAVLPDDFPRYPVGKFFKFDTWRQSAGRLRRGLPALLRARRGRMLAKELEAFREAKRHRPLIVLPPKDPAHGGASSEMSSNHQ

Formula C448H718N144O122S2

Absent Amino Acids C

Common Amino Acids R

Mass 10137.64

PI 11.73

Basic Residues 21

Acidic Residues 9

Hydrophobic Residues 32

Net Charge +9

Boman Index 24.10

Hydrophobicity -0.764

Aliphatic Index 66.97

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 6990

Absorbance 280nm 68.95

Polar Residues 14

number

9

A

13

R

1

N

5

D

0

C

4

E

3

Q

6

G

3

H

1

I

9

L

5

K

2

M

5

F

8

P

7

S

2

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 9 R: 13 N: 1 D: 5 C: 0 E: 4 Q: 3 G: 6 H: 3 I: 1 L: 9 K: 5 M: 2 F: 5 P: 8 S: 7 T: 2 W: 1 Y: 1 V: 4

Length

89

Formula

C448H718N144O122S2

Mass

10137.64

PI

11.73

Net Charge

+9

Boman Index

24.10

Hydrophobicity

-0.764

Evidence 1 Activity

Source & Reference

Database Source NA