TPDB

3D PDB MODEL

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TPDB ID TPDB58051

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 89-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

RDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFREAKRHRPLIALPTQDPAHGGAPPEMASNRK

FASTA

>TPDB58051|Neuropeptide|length=89
RDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFREAKRHRPLIALPTQDPAHGGAPPEMASNRK

Formula C455H725N143O122S1

Absent Amino Acids C

Common Amino Acids R

Mass 10182.71

PI 11.55

Basic Residues 20

Acidic Residues 8

Hydrophobic Residues 31

Net Charge +9

Boman Index 24.72

Hydrophobicity -0.857

Aliphatic Index 66.97

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 8480

Absorbance 280nm 83.28

Polar Residues 16

number

9

A

12

R

2

N

4

D

0

C

4

E

4

Q

5

G

3

H

1

I

9

L

5

K

1

M

4

F

11

P

3

S

5

T

1

W

2

Y

4

V

Amino Acid Distribution

A: 9 R: 12 N: 2 D: 4 C: 0 E: 4 Q: 4 G: 5 H: 3 I: 1 L: 9 K: 5 M: 1 F: 4 P: 11 S: 3 T: 5 W: 1 Y: 2 V: 4

Length

89

Formula

C455H725N143O122S1

Mass

10182.71

PI

11.55

Net Charge

+9

Boman Index

24.72

Hydrophobicity

-0.857

Evidence 1 Activity

Source & Reference

Database Source NA