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Peptide record

TPDB57877

Red pigment-concentrating hormone Neuropeptide standard

8 amino acids

3D PDB MODEL

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TPDB ID TPDB57877

Peptide_Name

Red pigment-concentrating hormone

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 8-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

QLNFSPGW

FASTA

>TPDB57877|Neuropeptide|length=8
QLNFSPGW

Formula C45H61N11O12

Absent Amino Acids ARDCEHIKMTYV

Common Amino Acids NQGLFPSW

Mass 948.05

PI 6.02

Basic Residues 0

Acidic Residues 0

Hydrophobic Residues 3

Net Charge -0

Boman Index -1.95

Hydrophobicity -0.513

Aliphatic Index 48.75

Half Life

Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 580.14

Polar Residues 3

number

Amino Acid Distribution

A: 0 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 1 H: 0 I: 0 L: 1 K: 0 M: 0 F: 1 P: 1 S: 1 T: 0 W: 1 Y: 0 V: 0

Length

Formula

C45H61N11O12

Mass

948.05

6.02

Net Charge

-0

Boman Index

-1.95

Hydrophobicity

-0.513

Evidence 1 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Cancer borealis

Family AKH/HRTH/RPCH

Evidence 2 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Homarus americanus

Family AKH/HRTH/RPCH

Evidence 3 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Nezara viridula

Family AKH/HRTH/RPCH

Evidence 4 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Callinectes sapidus

Family AKH/HRTH/RPCH

Evidence 5 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Carcinus maenas

Family AKH/HRTH/RPCH

Evidence 6 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Pandalus borealis

Family AKH/HRTH/RPCH

Evidence 7 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Penaeus merguiensis

Family AKH/HRTH/RPCH

Evidence 8 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Penaeus monodon

Family AKH/HRTH/RPCH

Evidence 9 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Acrosternum hilare

Family AKH/HRTH/RPCH

Evidence 10 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Banasa dimiata

Family AKH/HRTH/RPCH

Evidence 11 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Euschistus servus

Family AKH/HRTH/RPCH

Family

AKH/HRTH/RPCH