TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB57657

Peptide_Name

Corticotropin-like intermediary peptide

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 21-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

PVKVYPNGAEDESAEAFPLEF

FASTA

>TPDB57657|Neuropeptide|length=21
PVKVYPNGAEDESAEAFPLEF

Formula C106H153N23O35

Absent Amino Acids RCQHIMTW

Common Amino Acids E

Mass 2309.51

PI 3.58

Basic Residues 1

Acidic Residues 5

Hydrophobic Residues 9

Net Charge -4

Boman Index 8.08

Hydrophobicity -0.429

Aliphatic Index 60.48

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 1490

Absorbance 280nm 64.52

Polar Residues 3

number

3

A

0

R

1

N

1

D

0

C

4

E

0

Q

1

G

0

H

0

I

1

L

1

K

0

M

2

F

3

P

1

S

0

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 3 R: 0 N: 1 D: 1 C: 0 E: 4 Q: 0 G: 1 H: 0 I: 0 L: 1 K: 1 M: 0 F: 2 P: 3 S: 1 T: 0 W: 0 Y: 1 V: 2

Length

21

Formula

C106H153N23O35

Mass

2309.51

PI

3.58

Net Charge

Database Source NA

Source NeuroPepV2

Other

Organism Source Neovison vison

Family POMC

Family

POMC