TPDB

3D PDB MODEL

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TPDB ID TPDB57259

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 17-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

NVGTLARDWSLPQTRHZ

FASTA

>TPDB57259|Neuropeptide|length=17
NVGTLARDWSLPQTRHZ

Formula C80H127N27O24

Absent Amino Acids CEIKMFY

Common Amino Acids RLT

Mass 1851.05

PI 10.89

Basic Residues 3

Acidic Residues 1

Hydrophobic Residues 5

Net Charge +1

Boman Index 2.61

Hydrophobicity -0.835

Aliphatic Index 68.82

Half Life

Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 297.13

Polar Residues 5

number

1

A

2

R

1

N

1

D

0

C

0

E

1

Q

1

G

1

H

0

I

2

L

0

K

0

M

0

F

1

P

1

S

2

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 2 N: 1 D: 1 C: 0 E: 0 Q: 1 G: 1 H: 1 I: 0 L: 2 K: 0 M: 0 F: 0 P: 1 S: 1 T: 2 W: 1 Y: 0 V: 1

Length

17

Formula

C80H127N27O24

Mass

1851.05

PI

10.89

Net Charge

+1

Boman Index

2.61

Hydrophobicity

-0.835

Evidence 1 Activity

Source & Reference

Database Source NA