TPDB

3D PDB MODEL

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TPDB ID TPDB57040

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 32-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

NLSQNDLSQGRSNYINQLLAYQKWSQLMGTAZ

FASTA

>TPDB57040|Neuropeptide|length=32
NLSQNDLSQGRSNYINQLLAYQKWSQLMGTAZ

Formula C153H241N45O50S1

Absent Amino Acids CEHFPV

Common Amino Acids QL

Mass 3542.93

PI 9.56

Basic Residues 2

Acidic Residues 1

Hydrophobic Residues 12

Net Charge +1

Boman Index 0.88

Hydrophobicity -0.706

Aliphatic Index 79.38

Half Life

Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 8480

Absorbance 280nm 239.35

Polar Residues 16

number

2

A

1

R

4

N

1

D

0

C

0

E

5

Q

2

G

0

H

1

I

5

L

1

K

1

M

0

F

0

P

4

S

1

T

1

W

2

Y

0

V

Amino Acid Distribution

A: 2 R: 1 N: 4 D: 1 C: 0 E: 0 Q: 5 G: 2 H: 0 I: 1 L: 5 K: 1 M: 1 F: 0 P: 0 S: 4 T: 1 W: 1 Y: 2 V: 0

Length

32

Formula

C153H241N45O50S1

Mass

3542.93

PI

9.56

Net Charge

+1

Boman Index

0.88

Hydrophobicity

-0.706

Evidence 1 Activity

Source & Reference

Database Source NA