TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB57032

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 16-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

NLVIMGKKQRFHSWGZ

FASTA

>TPDB57032|Neuropeptide|length=16
NLVIMGKKQRFHSWGZ

Formula C82H129N25O19S1

Absent Amino Acids ADCEPTY

Common Amino Acids GK

Mass 1801.14

PI 11.64

Basic Residues 4

Acidic Residues 0

Hydrophobic Residues 6

Net Charge +3

Boman Index 0.89

Hydrophobicity -0.488

Aliphatic Index 66.88

Half Life

Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 305.36

Polar Residues 3

number

0

A

1

R

1

N

0

D

0

C

0

E

1

Q

2

G

1

H

1

I

1

L

2

K

1

M

1

F

0

P

1

S

0

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 0 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 2 H: 1 I: 1 L: 1 K: 2 M: 1 F: 1 P: 0 S: 1 T: 0 W: 1 Y: 0 V: 1

Length

16

Formula

C82H129N25O19S1

Mass

1801.14

PI

11.64

Net Charge

+3

Boman Index

0.89

Hydrophobicity

-0.488

Evidence 1 Activity

Source & Reference

Database Source NA