TPDB

3D PDB MODEL

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TPDB ID TPDB56926

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 35-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

NIRVLARTGMFPYVKQEEEESEEEDTEHEEQEDIZ

FASTA

>TPDB56926|Neuropeptide|length=35
NIRVLARTGMFPYVKQEEEESEEEDTEHEEQEDIZ

Formula C173H266N46O68S1

Absent Amino Acids CW

Common Amino Acids E

Mass 4110.34

PI 3.83

Basic Residues 4

Acidic Residues 13

Hydrophobic Residues 9

Net Charge -10

Boman Index 27.19

Hydrophobicity -1.426

Aliphatic Index 52.86

Half Life

Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 36.25

Polar Residues 7

number

1

A

2

R

1

N

2

D

0

C

11

E

2

Q

1

G

1

H

2

I

1

L

1

K

1

M

1

F

1

P

1

S

2

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 1 R: 2 N: 1 D: 2 C: 0 E: 11 Q: 2 G: 1 H: 1 I: 2 L: 1 K: 1 M: 1 F: 1 P: 1 S: 1 T: 2 W: 0 Y: 1 V: 2

Length

35

Formula

C173H266N46O68S1

Mass

4110.34

PI

3.83

Net Charge

-10

Boman Index

27.19

Hydrophobicity

-1.426

Evidence 1 Activity

Source & Reference

Database Source NA