TPDB

3D PDB MODEL

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TPDB ID TPDB56425

Peptide_Name

Ubiquitin-like protein 5

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 73-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYYQ

FASTA

>TPDB56425|Neuropeptide|length=73
MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDYEIHDGMNLELYYQ

Formula C383H611N103O110S4

Absent Amino Acids P

Common Amino Acids K

Mass 8546.93

PI 8.81

Basic Residues 14

Acidic Residues 10

Hydrophobic Residues 30

Net Charge +2

Boman Index 16.42

Hydrophobicity -0.415

Aliphatic Index 96.03

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 17085

Absorbance 280nm 199.90

Polar Residues 18

number

2

A

3

R

4

N

7

D

2

C

3

E

2

Q

5

G

2

H

6

I

7

L

9

K

2

M

1

F

0

P

1

S

5

T

2

W

4

Y

6

V

Amino Acid Distribution

A: 2 R: 3 N: 4 D: 7 C: 2 E: 3 Q: 2 G: 5 H: 2 I: 6 L: 7 K: 9 M: 2 F: 1 P: 0 S: 1 T: 5 W: 2 Y: 4 V: 6

Length

73

Formula

C383H611N103O110S4

Mass

8546.93

PI

8.81

Net Charge

+2

Database Source NA

Source NeuroPepV2

Other

Organism Source Psammomys obesus