TPDB

3D PDB MODEL

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TPDB ID TPDB56278

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 17-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

LSQIKDFYNEAGRPRFZ

FASTA

>TPDB56278|Neuropeptide|length=17
LSQIKDFYNEAGRPRFZ

Formula C88H133N25O25

Absent Amino Acids CHMTWV

Common Amino Acids RF

Mass 1941.18

PI 9.74

Basic Residues 3

Acidic Residues 2

Hydrophobic Residues 6

Net Charge +1

Boman Index 3.21

Hydrophobicity -0.900

Aliphatic Index 51.76

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 1490

Absorbance 280nm 76.76

Polar Residues 4

number

1

A

2

R

1

N

1

D

0

C

1

E

1

Q

1

G

0

H

1

I

1

L

1

K

0

M

2

F

1

P

1

S

0

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 2 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 1 H: 0 I: 1 L: 1 K: 1 M: 0 F: 2 P: 1 S: 1 T: 0 W: 0 Y: 1 V: 0

Length

17

Formula

C88H133N25O25

Mass

1941.18

PI

9.74

Net Charge

+1

Boman Index

3.21

Hydrophobicity

-0.900

Evidence 1 Activity

Source & Reference

Database Source NA