TPDB

3D PDB MODEL

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TPDB ID TPDB56017

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 28-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

LASFGSRIEPDRTEPGSGPNGIKAMRYZ

FASTA

>TPDB56017|Neuropeptide|length=28
LASFGSRIEPDRTEPGSGPNGIKAMRYZ

Formula C125H200N38O40S1

Absent Amino Acids CQHWV

Common Amino Acids G

Mass 2907.25

PI 9.74

Basic Residues 4

Acidic Residues 3

Hydrophobic Residues 8

Net Charge +1

Boman Index 7.21

Hydrophobicity -0.754

Aliphatic Index 48.93

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 1490

Absorbance 280nm 51.25

Polar Residues 6

number

2

A

3

R

1

N

1

D

0

C

2

E

0

Q

4

G

0

H

2

I

1

L

1

K

1

M

1

F

3

P

3

S

1

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 2 R: 3 N: 1 D: 1 C: 0 E: 2 Q: 0 G: 4 H: 0 I: 2 L: 1 K: 1 M: 1 F: 1 P: 3 S: 3 T: 1 W: 0 Y: 1 V: 0

Length

28

Formula

C125H200N38O40S1

Mass

2907.25

PI

9.74

Net Charge

+1

Boman Index

7.21

Hydrophobicity

-0.754

Evidence 1 Activity

Source & Reference

Database Source NA