TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB55880

Peptide_Name

FMRFamide-like neuropeptide AF1 Neuropeptide AF1 FLP-8

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 7-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

KNEFIRF

FASTA

>TPDB55880|Neuropeptide|length=7
KNEFIRF

Formula C45H68N12O11

Absent Amino Acids ADCQGHLMPSTWYV

Common Amino Acids F

Mass 953.11

PI 10.09

Basic Residues 2

Acidic Residues 1

Hydrophobic Residues 3

Net Charge +1

Boman Index 1.67

Hydrophobicity -0.757

Aliphatic Index 55.71

Half Life

Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 1

number

0

A

1

R

1

N

0

D

0

C

1

E

0

Q

0

G

0

H

1

I

0

L

1

K

0

M

2

F

0

P

0

S

0

T

0

W

0

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 1 M: 0 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0

Length

7

Formula

C45H68N12O11

Mass

953.11

PI

10.09

Net Charge

Database Source NA

Source NeuroPepV2

Other

Organism Source Fasciola hepatica

Family FMRFamide related peptide

Family

FMRFamide related peptide