TPDB

3D PDB MODEL

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TPDB ID TPDB55644

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 40-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

JNGLLGPPNRPGDLKNPGVLNNYLKALNEYQDALSRPRFZ

FASTA

>TPDB55644|Neuropeptide|length=40
JNGLLGPPNRPGDLKNPGVLNNYLKALNEYQDALSRPRFZ

Formula C188H298N56O55

Absent Amino Acids CHIMTW

Common Amino Acids L

Mass 4222.78

PI 9.97

Basic Residues 5

Acidic Residues 3

Hydrophobic Residues 13

Net Charge +2

Boman Index 7.21

Hydrophobicity -0.802

Aliphatic Index 80.50

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 2980

Absorbance 280nm 70.57

Polar Residues 10

number

2

A

3

R

6

N

2

D

0

C

1

E

1

Q

4

G

0

H

0

I

7

L

2

K

0

M

1

F

5

P

1

S

0

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 2 R: 3 N: 6 D: 2 C: 0 E: 1 Q: 1 G: 4 H: 0 I: 0 L: 7 K: 2 M: 0 F: 1 P: 5 S: 1 T: 0 W: 0 Y: 2 V: 1

Length

40

Formula

C188H298N56O55

Mass

4222.78

PI

9.97

Net Charge

+2

Boman Index

7.21

Hydrophobicity

-0.802

Evidence 1 Activity

Source & Reference

Database Source NA