TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB55538

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 10-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

JIGALENHYL

FASTA

>TPDB55538|Neuropeptide|length=10
JIGALENHYL

Formula C47H72N12O14

Absent Amino Acids RDCQKMFPSTWV

Common Amino Acids L

Mass 1029.16

PI 5.13

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 5

Net Charge -1

Boman Index 0.87

Hydrophobicity 0.200

Aliphatic Index 127.00

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 1490

Absorbance 280nm 144.78

Polar Residues 2

number

1

A

0

R

1

N

0

D

0

C

1

E

0

Q

1

G

1

H

1

I

2

L

0

K

0

M

0

F

0

P

0

S

0

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 1 H: 1 I: 1 L: 2 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 0

Length

10

Formula

C47H72N12O14

Mass

1029.16

PI

5.13

Net Charge

-1

Boman Index

0.87

Hydrophobicity

0.200

Evidence 1 Activity

Source & Reference

Database Source NA