TPDB

3D PDB MODEL

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TPDB ID TPDB55355

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 51-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

JYDSPSGQEAIEGPRVERMHAEASDPCAAGQCLTQNSASQLGGMWFGPRLZ

FASTA

>TPDB55355|Neuropeptide|length=51
JYDSPSGQEAIEGPRVERMHAEASDPCAAGQCLTQNSASQLGGMWFGPRLZ

Formula C219H338N66O74S4

Absent Amino Acids K

Common Amino Acids AG

Mass 5207.73

PI 4.43

Basic Residues 4

Acidic Residues 6

Hydrophobic Residues 16

Net Charge -3

Boman Index 11.52

Hydrophobicity -0.557

Aliphatic Index 48.04

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 7115

Absorbance 280nm 136.62

Polar Residues 14

number

6

A

3

R

1

N

2

D

2

C

4

E

4

Q

6

G

1

H

1

I

3

L

0

K

2

M

1

F

4

P

5

S

1

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 6 R: 3 N: 1 D: 2 C: 2 E: 4 Q: 4 G: 6 H: 1 I: 1 L: 3 K: 0 M: 2 F: 1 P: 4 S: 5 T: 1 W: 1 Y: 1 V: 1

Length

51

Formula

C219H338N66O74S4

Mass

5207.73

PI

4.43

Net Charge

-3

Boman Index

11.52

Hydrophobicity

-0.557

Evidence 1 Activity

Source & Reference

Database Source NA