TPDB

3D PDB MODEL

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TPDB ID TPDB55321

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 12-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

JVPQWAVGHFMZ

FASTA

>TPDB55321|Neuropeptide|length=12
JVPQWAVGHFMZ

Formula C56H78N14O12S1

Absent Amino Acids RNDCEILKSTY

Common Amino Acids V

Mass 1171.38

PI 7.85

Basic Residues 1

Acidic Residues 0

Hydrophobic Residues 6

Net Charge +0

Boman Index -1.24

Hydrophobicity 0.442

Aliphatic Index 56.67

Half Life

Mammalian: Yeast: E.coli:

Extinction Coefficient Cystines 5500

Absorbance 280nm 469.53

Polar Residues 1

number

1

A

0

R

0

N

0

D

0

C

0

E

1

Q

1

G

1

H

0

I

0

L

0

K

1

M

1

F

1

P

0

S

0

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 1 H: 1 I: 0 L: 0 K: 0 M: 1 F: 1 P: 1 S: 0 T: 0 W: 1 Y: 0 V: 2

Length

12

Formula

C56H78N14O12S1

Mass

1171.38

PI

7.85

Net Charge

+0

Boman Index

-1.24

Hydrophobicity

0.442

Evidence 1 Activity

Source & Reference

Database Source NA