TPDB

3D PDB MODEL

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TPDB ID TPDB55277

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 44-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

ITKPVEDDSQEKQVLPGEEASSYVTSRLLPSYTSDSSGFWPLRZ

FASTA

>TPDB55277|Neuropeptide|length=44
ITKPVEDDSQEKQVLPGEEASSYVTSRLLPSYTSDSSGFWPLRZ

Formula C212H328N54O73

Absent Amino Acids NCHM

Common Amino Acids S

Mass 4801.25

PI 4.22

Basic Residues 4

Acidic Residues 7

Hydrophobic Residues 13

Net Charge -3

Boman Index 12.44

Hydrophobicity -0.695

Aliphatic Index 66.36

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 8480

Absorbance 280nm 176.62

Polar Residues 15

number

1

A

2

R

0

N

3

D

0

C

4

E

2

Q

2

G

0

H

1

I

4

L

2

K

0

M

1

F

4

P

8

S

3

T

1

W

2

Y

3

V

Amino Acid Distribution

A: 1 R: 2 N: 0 D: 3 C: 0 E: 4 Q: 2 G: 2 H: 0 I: 1 L: 4 K: 2 M: 0 F: 1 P: 4 S: 8 T: 3 W: 1 Y: 2 V: 3

Length

44

Formula

C212H328N54O73

Mass

4801.25

PI

4.22

Net Charge

-3

Boman Index

12.44

Hydrophobicity

-0.695

Evidence 1 Activity

Source & Reference

Database Source NA