TPDB

3D PDB MODEL

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TPDB ID TPDB55174

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 41-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

ILSTFSSDPVIDFDLEKDKDLMKYMQDLNNYSQLYGRPRFZ

FASTA

>TPDB55174|Neuropeptide|length=41
ILSTFSSDPVIDFDLEKDKDLMKYMQDLNNYSQLYGRPRFZ

Formula C216H329N53O67S2

Absent Amino Acids ACHW

Common Amino Acids D

Mass 4804.42

PI 4.32

Basic Residues 5

Acidic Residues 7

Hydrophobic Residues 16

Net Charge -2

Boman Index 7.54

Hydrophobicity -0.639

Aliphatic Index 73.66

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 4470

Absorbance 280nm 93.04

Polar Residues 12

number

0

A

2

R

2

N

6

D

0

C

1

E

2

Q

1

G

0

H

2

I

5

L

3

K

2

M

3

F

2

P

4

S

1

T

0

W

3

Y

1

V

Amino Acid Distribution

A: 0 R: 2 N: 2 D: 6 C: 0 E: 1 Q: 2 G: 1 H: 0 I: 2 L: 5 K: 3 M: 2 F: 3 P: 2 S: 4 T: 1 W: 0 Y: 3 V: 1

Length

41

Formula

C216H329N53O67S2

Mass

4804.42

PI

4.32

Net Charge

-2

Boman Index

7.54

Hydrophobicity

-0.639

Evidence 1 Activity

Source & Reference

Database Source NA