TPDB

3D PDB MODEL

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TPDB ID TPDB55025

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 20-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

HRVMKGGCLNYGHSCLGAHZ

FASTA

>TPDB55025|Neuropeptide|length=20
HRVMKGGCLNYGHSCLGAHZ

Formula C85H134N30O23S3

Absent Amino Acids DEQIFPTW

Common Amino Acids G

Mass 2040.37

PI 9.06

Basic Residues 5

Acidic Residues 0

Hydrophobic Residues 6

Net Charge +2

Boman Index 2.40

Hydrophobicity -0.235

Aliphatic Index 58.50

Half Life

Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 1615

Absorbance 280nm 79.15

Polar Residues 5

number

1

A

1

R

1

N

0

D

2

C

0

E

0

Q

4

G

3

H

0

I

2

L

1

K

1

M

0

F

0

P

1

S

0

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 0 C: 2 E: 0 Q: 0 G: 4 H: 3 I: 0 L: 2 K: 1 M: 1 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 1 V: 1

Length

20

Formula

C85H134N30O23S3

Mass

2040.37

PI

9.06

Net Charge

+2

Boman Index

2.40

Hydrophobicity

-0.235

Evidence 1 Activity

Source & Reference

Database Source NA