TPDB

3D PDB MODEL

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TPDB ID TPDB54968

Peptide_Name

YRamide

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 7-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

HIGSLYR

FASTA

>TPDB54968|Neuropeptide|length=7
HIGSLYR

Formula C38H60N12O10

Absent Amino Acids ANDCEQKMFPTWV

Common Amino Acids RGHILSY

Mass 844.97

PI 9.88

Basic Residues 2

Acidic Residues 0

Hydrophobic Residues 3

Net Charge +1

Boman Index 0.10

Hydrophobicity -0.271

Aliphatic Index 111.43

Half Life

Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 176.34

Polar Residues 2

number

0

A

1

R

0

N

0

D

0

C

0

E

0

Q

1

G

1

H

1

I

1

L

0

K

0

M

0

F

0

P

1

S

0

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 1 L: 1 K: 0 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 1 V: 0

Length

7

Formula

C38H60N12O10

Mass

844.97

PI

9.88

Net Charge

+1

Database Source NA

Source NeuroPepV2

Other

Organism Source Ocypode ceratophthalma