TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB54946

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 27-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

HIGAVARWGWYPEARFSRFSGGATGLZ

FASTA

>TPDB54946|Neuropeptide|length=27
HIGAVARWGWYPEARFSRFSGGATGLZ

Formula C132H189N39O33

Absent Amino Acids NDCQKM

Common Amino Acids G

Mass 2850.19

PI 11.06

Basic Residues 4

Acidic Residues 1

Hydrophobic Residues 12

Net Charge +2

Boman Index -2.07

Hydrophobicity -0.144

Aliphatic Index 54.44

Half Life

Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 12490

Absorbance 280nm 438.22

Polar Residues 4

number

4

A

3

R

0

N

0

D

0

C

1

E

0

Q

5

G

1

H

1

I

1

L

0

K

0

M

2

F

1

P

2

S

1

T

2

W

1

Y

1

V

Amino Acid Distribution

A: 4 R: 3 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 5 H: 1 I: 1 L: 1 K: 0 M: 0 F: 2 P: 1 S: 2 T: 1 W: 2 Y: 1 V: 1

Length

27

Formula

C132H189N39O33

Mass

2850.19

PI

11.06

Net Charge

+2

Boman Index

-2.07

Hydrophobicity

-0.144

Evidence 1 Activity

Source & Reference

Database Source NA