TPDB

3D PDB MODEL

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TPDB ID TPDB54246

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 36-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GLTRTCLGDTLDKRGLCGPGLSSALQIVCPNGYHYZ

FASTA

>TPDB54246|Neuropeptide|length=36
GLTRTCLGDTLDKRGLCGPGLSSALQIVCPNGYHYZ

Formula C158H256N46O49S3

Absent Amino Acids EMFW

Common Amino Acids GL

Mass 3680.23

PI 8.01

Basic Residues 4

Acidic Residues 2

Hydrophobic Residues 11

Net Charge +1

Boman Index 2.30

Hydrophobicity -0.033

Aliphatic Index 86.67

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3105

Absorbance 280nm 84.37

Polar Residues 12

number

1

A

2

R

1

N

2

D

3

C

0

E

1

Q

6

G

1

H

1

I

6

L

1

K

0

M

0

F

2

P

2

S

3

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 1 R: 2 N: 1 D: 2 C: 3 E: 0 Q: 1 G: 6 H: 1 I: 1 L: 6 K: 1 M: 0 F: 0 P: 2 S: 2 T: 3 W: 0 Y: 2 V: 1

Length

36

Formula

C158H256N46O49S3

Mass

3680.23

PI

8.01

Net Charge

+1

Boman Index

2.30

Hydrophobicity

-0.033

Evidence 1 Activity

Source & Reference

Database Source NA