TPDB

3D PDB MODEL

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TPDB ID TPDB54102

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 25-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GHFFPAETGGVGDYGISPTFVPRLZ

FASTA

>TPDB54102|Neuropeptide|length=25
GHFFPAETGGVGDYGISPTFVPRLZ

Formula C118H169N29O33

Absent Amino Acids NCQKMW

Common Amino Acids G

Mass 2521.81

PI 5.22

Basic Residues 2

Acidic Residues 2

Hydrophobic Residues 9

Net Charge -1

Boman Index 1.60

Hydrophobicity 0.076

Aliphatic Index 58.40

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 59.08

Polar Residues 4

number

1

A

1

R

0

N

1

D

0

C

1

E

0

Q

5

G

1

H

1

I

1

L

0

K

0

M

3

F

3

P

1

S

2

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 1 R: 1 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 5 H: 1 I: 1 L: 1 K: 0 M: 0 F: 3 P: 3 S: 1 T: 2 W: 0 Y: 1 V: 2

Length

25

Formula

C118H169N29O33

Mass

2521.81

PI

5.22

Net Charge

-1

Boman Index

1.60

Hydrophobicity

0.076

Evidence 1 Activity

Source & Reference

Database Source NA