TPDB

3D PDB MODEL

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TPDB ID TPDB53812

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 30-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GENIEPKATNDKSNELMARVDRFYLGSRYZ

FASTA

>TPDB53812|Neuropeptide|length=30
GENIEPKATNDKSNELMARVDRFYLGSRYZ

Formula C145H229N43O48S1

Absent Amino Acids CQHW

Common Amino Acids RNE

Mass 3374.73

PI 7.10

Basic Residues 5

Acidic Residues 5

Hydrophobic Residues 10

Net Charge +0

Boman Index 10.12

Hydrophobicity -1.067

Aliphatic Index 55.33

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 88.30

Polar Residues 8

number

2

A

3

R

3

N

2

D

0

C

3

E

0

Q

2

G

0

H

1

I

2

L

2

K

1

M

1

F

1

P

2

S

1

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 2 R: 3 N: 3 D: 2 C: 0 E: 3 Q: 0 G: 2 H: 0 I: 1 L: 2 K: 2 M: 1 F: 1 P: 1 S: 2 T: 1 W: 0 Y: 2 V: 1

Length

30

Formula

C145H229N43O48S1

Mass

3374.73

PI

7.10

Net Charge

+0

Boman Index

10.12

Hydrophobicity

-1.067

Evidence 1 Activity

Source & Reference

Database Source NA