TPDB

3D PDB MODEL

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TPDB ID TPDB53752

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 38-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GCHVGTWQVHNVGNTLFRMGQRRGKDGSAEVNDPRGYZ

FASTA

>TPDB53752|Neuropeptide|length=38
GCHVGTWQVHNVGNTLFRMGQRRGKDGSAEVNDPRGYZ

Formula C173H268N60O53S2

Absent Amino Acids I

Common Amino Acids G

Mass 4100.52

PI 9.76

Basic Residues 7

Acidic Residues 3

Hydrophobic Residues 10

Net Charge +2

Boman Index 9.14

Hydrophobicity -0.934

Aliphatic Index 43.42

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 170.47

Polar Residues 10

number

1

A

4

R

3

N

2

D

1

C

1

E

2

Q

7

G

2

H

0

I

1

L

1

K

1

M

1

F

1

P

1

S

2

T

1

W

1

Y

4

V

Amino Acid Distribution

A: 1 R: 4 N: 3 D: 2 C: 1 E: 1 Q: 2 G: 7 H: 2 I: 0 L: 1 K: 1 M: 1 F: 1 P: 1 S: 1 T: 2 W: 1 Y: 1 V: 4

Length

38

Formula

C173H268N60O53S2

Mass

4100.52

PI

9.76

Net Charge

+2

Boman Index

9.14

Hydrophobicity

-0.934

Evidence 1 Activity

Source & Reference

Database Source NA