TPDB

3D PDB MODEL

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TPDB ID TPDB53422

Peptide_Name

Pyrokinin-5

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 17-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

FGETSGETKGMWFGPRL

FASTA

>TPDB53422|Neuropeptide|length=17
FGETSGETKGMWFGPRL

Formula C86H126N22O25S1

Absent Amino Acids ANDCQHIYV

Common Amino Acids G

Mass 1900.14

PI 7.09

Basic Residues 2

Acidic Residues 2

Hydrophobic Residues 5

Net Charge +0

Boman Index 1.84

Hydrophobicity -0.612

Aliphatic Index 22.94

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 5500

Absorbance 280nm 289.45

Polar Residues 3

number

0

A

1

R

0

N

0

D

0

C

2

E

0

Q

4

G

0

H

0

I

1

L

1

K

1

M

2

F

1

P

1

S

2

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 0 C: 0 E: 2 Q: 0 G: 4 H: 0 I: 0 L: 1 K: 1 M: 1 F: 2 P: 1 S: 1 T: 2 W: 1 Y: 0 V: 0

Length

17

Formula

C86H126N22O25S1

Mass

1900.14

PI

7.09

Net Charge

Database Source NA

Source NeuroPepV2

Other

Organism Source Rhyparobia maderae

Family Pyrokinin

Family

Pyrokinin