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Peptide record

TPDB53085

Red pigment-concentrating hormone Neuropeptide standard

8 amino acids

3D PDB MODEL

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TPDB ID TPDB53085

Peptide_Name

Red pigment-concentrating hormone

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 8-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

ELNFSPGW

FASTA

>TPDB53085|Neuropeptide|length=8
ELNFSPGW

Formula C45H60N10O13

Absent Amino Acids ARDCQHIKMTYV

Common Amino Acids NEGLFPSW

Mass 949.03

PI 3.29

Basic Residues 0

Acidic Residues 1

Hydrophobic Residues 3

Net Charge -1

Boman Index -0.51

Hydrophobicity -0.513

Aliphatic Index 48.75

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 579.54

Polar Residues 2

number

Amino Acid Distribution

A: 0 R: 0 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 1 H: 0 I: 0 L: 1 K: 0 M: 0 F: 1 P: 1 S: 1 T: 0 W: 1 Y: 0 V: 0

Length

Formula

C45H60N10O13

Mass

949.03

3.29

Net Charge

-1

Boman Index

-0.51

Hydrophobicity

-0.513

Evidence 1 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Callinectes sapidus

Family AKH/HRTH/RPCH

Evidence 2 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Penaeus vannamei

Family AKH/HRTH/RPCH

Evidence 3 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Cancer borealis

Family AKH/HRTH/RPCH

Evidence 4 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Carcinus maenas

Family AKH/HRTH/RPCH

Evidence 5 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Faxonius limosus

Family AKH/HRTH/RPCH

Evidence 6 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Homarus americanus

Family AKH/HRTH/RPCH

Evidence 7 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Jasus lalandii

Family AKH/HRTH/RPCH

Evidence 8 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Leptuca pugilator

Family AKH/HRTH/RPCH

Evidence 9 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Metacarcinus magister

Family AKH/HRTH/RPCH

Evidence 10 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Nezara viridula

Family AKH/HRTH/RPCH

Evidence 11 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Pandalus borealis

Family AKH/HRTH/RPCH

Evidence 12 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Penaeus japonicus

Family AKH/HRTH/RPCH

Evidence 13 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Pugettia producta

Family AKH/HRTH/RPCH

Family

AKH/HRTH/RPCH