TPDB

3D PDB MODEL

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TPDB ID TPDB52951

Peptide_Name

RYamide

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 8-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

EGFYSQRY

FASTA

>TPDB52951|Neuropeptide|length=8
EGFYSQRY

Formula C48H64N12O15

Absent Amino Acids ANDCHILKMPTWV

Common Amino Acids Y

Mass 1049.11

PI 6.84

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 3

Net Charge -0

Boman Index 0.54

Hydrophobicity -1.562

Aliphatic Index 0.00

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 284.05

Polar Residues 4

number

0

A

1

R

0

N

0

D

0

C

1

E

1

Q

1

G

0

H

0

I

0

L

0

K

0

M

1

F

0

P

1

S

0

T

0

W

2

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 0 C: 0 E: 1 Q: 1 G: 1 H: 0 I: 0 L: 0 K: 0 M: 0 F: 1 P: 0 S: 1 T: 0 W: 0 Y: 2 V: 0

Length

8

Formula

C48H64N12O15

Mass

1049.11

PI

6.84

Net Charge

Database Source NA

Source NeuroPepV2

Other

Organism Source Penaeus vannamei

Family NPY

Family

NPY