TPDB

3D PDB MODEL

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TPDB ID TPDB52868

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 12-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

EDQANLKSIFGZ

FASTA

>TPDB52868|Neuropeptide|length=12
EDQANLKSIFGZ

Formula C53H84N14O19

Absent Amino Acids RCHMPTWYV

Common Amino Acids ANDEQGILKFS

Mass 1221.33

PI 4.07

Basic Residues 1

Acidic Residues 2

Hydrophobic Residues 4

Net Charge -1

Boman Index 3.21

Hydrophobicity -0.517

Aliphatic Index 73.33

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 3

number

1

A

0

R

1

N

1

D

0

C

1

E

1

Q

1

G

0

H

1

I

1

L

1

K

0

M

1

F

0

P

1

S

0

T

0

W

0

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 1 H: 0 I: 1 L: 1 K: 1 M: 0 F: 1 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 0

Length

12

Formula

C53H84N14O19

Mass

1221.33

PI

4.07

Net Charge

-1

Boman Index

3.21

Hydrophobicity

-0.517

Evidence 1 Activity

Source & Reference

Database Source NA