TPDB

3D PDB MODEL

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TPDB ID TPDB52850

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 27-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

EDDVASTLMKLSQIKQHYSNVGRPRFZ

FASTA

>TPDB52850|Neuropeptide|length=27
EDDVASTLMKLSQIKQHYSNVGRPRFZ

Formula C131H211N39O41S1

Absent Amino Acids CW

Common Amino Acids S

Mass 3020.41

PI 9.65

Basic Residues 5

Acidic Residues 3

Hydrophobic Residues 9

Net Charge +1

Boman Index 7.85

Hydrophobicity -0.756

Aliphatic Index 68.52

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 49.33

Polar Residues 8

number

1

A

2

R

1

N

2

D

0

C

1

E

2

Q

1

G

1

H

1

I

2

L

2

K

1

M

1

F

1

P

3

S

1

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 1 R: 2 N: 1 D: 2 C: 0 E: 1 Q: 2 G: 1 H: 1 I: 1 L: 2 K: 2 M: 1 F: 1 P: 1 S: 3 T: 1 W: 0 Y: 1 V: 2

Length

27

Formula

C131H211N39O41S1

Mass

3020.41

PI

9.65

Net Charge

+1

Boman Index

7.85

Hydrophobicity

-0.756

Evidence 1 Activity

Source & Reference

Database Source NA