TPDB

3D PDB MODEL

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TPDB ID TPDB52671

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 32-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

DQQIEDFDNDTGLADAVDQKSIWSPQLRLRFZ

FASTA

>TPDB52671|Neuropeptide|length=32
DQQIEDFDNDTGLADAVDQKSIWSPQLRLRFZ

Formula C158H242N44O54

Absent Amino Acids CHMY

Common Amino Acids D

Mass 3621.92

PI 3.79

Basic Residues 3

Acidic Residues 7

Hydrophobic Residues 11

Net Charge -4

Boman Index 8.93

Hydrophobicity -0.822

Aliphatic Index 76.25

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 151.85

Polar Residues 8

number

2

A

2

R

1

N

6

D

0

C

1

E

4

Q

1

G

0

H

2

I

3

L

1

K

0

M

2

F

1

P

2

S

1

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 2 R: 2 N: 1 D: 6 C: 0 E: 1 Q: 4 G: 1 H: 0 I: 2 L: 3 K: 1 M: 0 F: 2 P: 1 S: 2 T: 1 W: 1 Y: 0 V: 1

Length

32

Formula

C158H242N44O54

Mass

3621.92

PI

3.79

Net Charge

-4

Boman Index

8.93

Hydrophobicity

-0.822

Evidence 1 Activity

Source & Reference

Database Source NA