TPDB

3D PDB MODEL

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TPDB ID TPDB52376

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 40-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

DGGDVMSGGEGGEMTAMADAIKYLQGLDKVYGQAARPRFZ

FASTA

>TPDB52376|Neuropeptide|length=40
DGGDVMSGGEGGEMTAMADAIKYLQGLDKVYGQAARPRFZ

Formula C173H273N49O58S3

Absent Amino Acids NCHW

Common Amino Acids G

Mass 4063.54

PI 4.31

Basic Residues 4

Acidic Residues 6

Hydrophobic Residues 16

Net Charge -2

Boman Index 8.68

Hydrophobicity -0.392

Aliphatic Index 56.25

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 73.33

Polar Residues 6

number

5

A

2

R

0

N

4

D

0

C

2

E

2

Q

8

G

0

H

1

I

2

L

2

K

3

M

1

F

1

P

1

S

1

T

0

W

2

Y

2

V

Amino Acid Distribution

A: 5 R: 2 N: 0 D: 4 C: 0 E: 2 Q: 2 G: 8 H: 0 I: 1 L: 2 K: 2 M: 3 F: 1 P: 1 S: 1 T: 1 W: 0 Y: 2 V: 2

Length

40

Formula

C173H273N49O58S3

Mass

4063.54

PI

4.31

Net Charge

-2

Boman Index

8.68

Hydrophobicity

-0.392

Evidence 1 Activity

Source & Reference

Database Source NA