TPDB

3D PDB MODEL

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TPDB ID TPDB52370

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 26-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

DGEMSPIWVARGKEEGETHPFWVARZ

FASTA

>TPDB52370|Neuropeptide|length=26
DGEMSPIWVARGKEEGETHPFWVARZ

Formula C129H190N36O38S1

Absent Amino Acids NCQLY

Common Amino Acids E

Mass 2885.21

PI 4.76

Basic Residues 4

Acidic Residues 5

Hydrophobic Residues 9

Net Charge -2

Boman Index 8.51

Hydrophobicity -0.773

Aliphatic Index 45.00

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 11000

Absorbance 280nm 381.26

Polar Residues 2

number

2

A

2

R

0

N

1

D

0

C

4

E

0

Q

3

G

1

H

1

I

0

L

1

K

1

M

1

F

2

P

1

S

1

T

2

W

0

Y

2

V

Amino Acid Distribution

A: 2 R: 2 N: 0 D: 1 C: 0 E: 4 Q: 0 G: 3 H: 1 I: 1 L: 0 K: 1 M: 1 F: 1 P: 2 S: 1 T: 1 W: 2 Y: 0 V: 2

Length

26

Formula

C129H190N36O38S1

Mass

2885.21

PI

4.76

Net Charge

-2

Boman Index

8.51

Hydrophobicity

-0.773

Evidence 1 Activity

Source & Reference

Database Source NA