TPDB

3D PDB MODEL

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TPDB ID TPDB52328

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 19-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

DEVALPARGGSHVWSSRYZ

FASTA

>TPDB52328|Neuropeptide|length=19
DEVALPARGGSHVWSSRYZ

Formula C87H131N27O27

Absent Amino Acids NCQIKMFT

Common Amino Acids S

Mass 1987.16

PI 7.77

Basic Residues 3

Acidic Residues 2

Hydrophobic Residues 7

Net Charge +0

Boman Index 3.14

Hydrophobicity -0.547

Aliphatic Index 61.58

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 351.76

Polar Residues 4

number

2

A

2

R

0

N

1

D

0

C

1

E

0

Q

2

G

1

H

0

I

1

L

0

K

0

M

0

F

1

P

3

S

0

T

1

W

1

Y

2

V

Amino Acid Distribution

A: 2 R: 2 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 2 H: 1 I: 0 L: 1 K: 0 M: 0 F: 0 P: 1 S: 3 T: 0 W: 1 Y: 1 V: 2

Length

19

Formula

C87H131N27O27

Mass

1987.16

PI

7.77

Net Charge

+0

Boman Index

3.14

Hydrophobicity

-0.547

Evidence 1 Activity

Source & Reference

Database Source NA