TPDB

3D PDB MODEL

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TPDB ID TPDB52220

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 22-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

DAGYGQISHKRHKTDSFVGLMZ

FASTA

>TPDB52220|Neuropeptide|length=22
DAGYGQISHKRHKTDSFVGLMZ

Formula C102H159N31O31S1

Absent Amino Acids NCEPW

Common Amino Acids G

Mass 2347.63

PI 9.65

Basic Residues 5

Acidic Residues 2

Hydrophobic Residues 7

Net Charge +1

Boman Index 4.91

Hydrophobicity -0.682

Aliphatic Index 53.18

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 63.47

Polar Residues 5

number

1

A

1

R

0

N

2

D

0

C

0

E

1

Q

3

G

2

H

1

I

1

L

2

K

1

M

1

F

0

P

2

S

1

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 0 D: 2 C: 0 E: 0 Q: 1 G: 3 H: 2 I: 1 L: 1 K: 2 M: 1 F: 1 P: 0 S: 2 T: 1 W: 0 Y: 1 V: 1

Length

22

Formula

C102H159N31O31S1

Mass

2347.63

PI

9.65

Net Charge

+1

Boman Index

4.91

Hydrophobicity

-0.682

Evidence 1 Activity

Source & Reference

Database Source NA