TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB52163

Peptide_Name

Calcitonin

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 32-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

CSNLSTCVLGTYSKDLNNFHTFSGIGFGAETP

FASTA

>TPDB52163|Neuropeptide|length=32
CSNLSTCVLGTYSKDLNNFHTFSGIGFGAETP

Formula C148H222N38O49S2

Absent Amino Acids RQMW

Common Amino Acids GST

Mass 3381.74

PI 5.21

Basic Residues 2

Acidic Residues 2

Hydrophobic Residues 10

Net Charge -1

Boman Index 1.13

Hydrophobicity 0.006

Aliphatic Index 60.94

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1615

Absorbance 280nm 47.76

Polar Residues 14

number

1

A

0

R

3

N

1

D

2

C

1

E

0

Q

4

G

1

H

1

I

3

L

1

K

0

M

3

F

1

P

4

S

4

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 3 D: 1 C: 2 E: 1 Q: 0 G: 4 H: 1 I: 1 L: 3 K: 1 M: 0 F: 3 P: 1 S: 4 T: 4 W: 0 Y: 1 V: 1

Length

32

Formula

C148H222N38O49S2

Mass

3381.74

PI

5.21

Net Charge

-1

Boman Index

1.13

Hydrophobicity

0.006

Evidence 1 Activity

Activity

Detail Source Activity Neuropeptide

Source & Reference

Database Source NA

Source NeuroPepV2

Other

Organism Source Canis lupus familiaris

Family Calcitonin

Family

Calcitonin