TPDB

3D PDB MODEL

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TPDB ID TPDB51912

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 35-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

AVKLSSDGNYPFDLSKEDGAQPYFMTPRLRFYPIZ

FASTA

>TPDB51912|Neuropeptide|length=35
AVKLSSDGNYPFDLSKEDGAQPYFMTPRLRFYPIZ

Formula C181H268N44O52S1

Absent Amino Acids CHW

Common Amino Acids P

Mass 3924.44

PI 6.94

Basic Residues 4

Acidic Residues 4

Hydrophobic Residues 14

Net Charge -0

Boman Index 3.96

Hydrophobicity -0.514

Aliphatic Index 58.57

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 4470

Absorbance 280nm 113.90

Polar Residues 9

number

2

A

2

R

1

N

3

D

0

C

1

E

1

Q

2

G

0

H

1

I

3

L

2

K

1

M

3

F

4

P

3

S

1

T

0

W

3

Y

1

V

Amino Acid Distribution

A: 2 R: 2 N: 1 D: 3 C: 0 E: 1 Q: 1 G: 2 H: 0 I: 1 L: 3 K: 2 M: 1 F: 3 P: 4 S: 3 T: 1 W: 0 Y: 3 V: 1

Length

35

Formula

C181H268N44O52S1

Mass

3924.44

PI

6.94

Net Charge

-0

Boman Index

3.96

Hydrophobicity

-0.514

Evidence 1 Activity

Source & Reference

Database Source NA