TPDB

3D PDB MODEL

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TPDB ID TPDB51194

Peptide_Name

C-terminal-flanking peptide Protachykinin-1

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 16-aa standard natural neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

ALNSVAYERSAMQNYE

FASTA

>TPDB51194|Neuropeptide|length=16
ALNSVAYERSAMQNYE

Formula C78H120N22O28S1

Absent Amino Acids DCGHIKFPTW

Common Amino Acids A

Mass 1846.00

PI 4.26

Basic Residues 1

Acidic Residues 2

Hydrophobic Residues 8

Net Charge -1

Boman Index 3.42

Hydrophobicity -0.681

Aliphatic Index 61.25

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 161.43

Polar Residues 7

number

3

A

1

R

2

N

0

D

0

C

2

E

1

Q

0

G

0

H

0

I

1

L

0

K

1

M

0

F

0

P

2

S

0

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 3 R: 1 N: 2 D: 0 C: 0 E: 2 Q: 1 G: 0 H: 0 I: 0 L: 1 K: 0 M: 1 F: 0 P: 0 S: 2 T: 0 W: 0 Y: 2 V: 1

Length

16

Formula

C78H120N22O28S1

Mass

1846.00

PI

4.26

Net Charge

Database Source NA

Source NeuroPepV2

Other

Organism Source Rattus norvegicus

Family Tachykinin

Family

ProSAAS Tachykinin