TPDB

3D PDB MODEL

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TPDB ID TPDB50892

Activity

Neuropeptide

Activity_category_statistics

Neuroactive peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 11-aa modified neuropeptide peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

AEPNYQDFVLZ

FASTA

>TPDB50892|Neuropeptide|length=11
AEPNYQDFVLZ

Formula C55H78N12O18

Absent Amino Acids RCGHIKMSTW

Common Amino Acids ANDEQLFPYV

Mass 1195.29

PI 3.01

Basic Residues 0

Acidic Residues 2

Hydrophobic Residues 5

Net Charge -2

Boman Index 1.97

Hydrophobicity -0.391

Aliphatic Index 70.91

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 124.66

Polar Residues 3

number

1

A

0

R

1

N

1

D

0

C

1

E

1

Q

0

G

0

H

0

I

1

L

0

K

0

M

1

F

1

P

0

S

0

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 0 H: 0 I: 0 L: 1 K: 0 M: 0 F: 1 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 1

Length

11

Formula

C55H78N12O18

Mass

1195.29

PI

3.01

Net Charge

-2

Boman Index

1.97

Hydrophobicity

-0.391

Evidence 1 Activity

Source & Reference

Database Source NA