Back to search

Peptide record

TPDB50586

Antifungal standard
40 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB50586
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 40-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
VKVGLATKAERASRQQRKQRKNRQKTLRGTRKVKGAKAKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C194H360N76O52
DCHIMFPWY
K
4589.47
12.81
17
1
10
+16
4.32
-1.660
53.75
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
9
Residue Composition
number
5
A
7
R
1
N
0
D
0
C
1
E
4
Q
3
G
0
H
0
I
2
L
10
K
0
M
0
F
0
P
1
S
3
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 5 R: 7 N: 1 D: 0 C: 0 E: 1 Q: 4 G: 3 H: 0 I: 0 L: 2 K: 10 M: 0 F: 0 P: 0 S: 1 T: 3 W: 0 Y: 0 V: 3
Chemical Descriptors
40 reviewed residue count
C194H360N76O52 sequence-only estimate (linear, free termini)
4589.47 sequence-only estimate (linear, free termini)
12.81 sequence-only estimate (linear, free termini)
+16 sequence-only estimate (linear, free termini)
4.32 sequence-only estimate (linear, free termini)
-1.660 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA