TPDB

3D PDB MODEL

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TPDB ID TPDB50579

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 82-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

TKGTTSMGQRHGRTHILCRRCGRNSYHVQWERCAACAYPRASRRRYNWSVKAIKRRRTGTGRCRYLKVVNRRIANHFKTPKA

FASTA

>TPDB50579|Antifungal|length=82
TKGTTSMGQRHGRTHILCRRCGRNSYHVQWERCAACAYPRASRRRYNWSVKAIKRRRTGTGRCRYLKVVNRRIANHFKTPKA

Formula C413H679N155O106S6

Absent Amino Acids D

Common Amino Acids R

Mass 9704.27

PI 12.16

Basic Residues 27

Acidic Residues 1

Hydrophobic Residues 24

Net Charge +22

Boman Index 17.89

Hydrophobicity -1.100

Aliphatic Index 46.46

Half Life

Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 17210

Absorbance 280nm 177.34

Polar Residues 26

number

7

A

17

R

4

N

0

D

5

C

1

E

2

Q

6

G

4

H

3

I

2

L

6

K

1

M

1

F

2

P

4

S

7

T

2

W

4

Y

4

V

Amino Acid Distribution

A: 7 R: 17 N: 4 D: 0 C: 5 E: 1 Q: 2 G: 6 H: 4 I: 3 L: 2 K: 6 M: 1 F: 1 P: 2 S: 4 T: 7 W: 2 Y: 4 V: 4

Length

82

Formula

C413H679N155O106S6

Mass

9704.27

PI

12.16

Net Charge

+22

Boman Index

17.89

Hydrophobicity

-1.100

Evidence 1 Activity

Source & Reference

Database Source NA