Back to search

Peptide record

TPDB50574

Antifungal standard
50 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB50574
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 50-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
SSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C281H468N98O64S1
DCEV
RK
6275.49
12.95
20
0
14
+18
3.94
-1.518
56.60
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
12490
1.99
13
Residue Composition
number
1
A
9
R
3
N
0
D
0
C
0
E
3
Q
2
G
2
H
4
I
3
L
9
K
1
M
2
F
2
P
3
S
3
T
2
W
1
Y
0
V
Amino Acid Distribution
A: 1 R: 9 N: 3 D: 0 C: 0 E: 0 Q: 3 G: 2 H: 2 I: 4 L: 3 K: 9 M: 1 F: 2 P: 2 S: 3 T: 3 W: 2 Y: 1 V: 0
Chemical Descriptors
50 reviewed residue count
C281H468N98O64S1 sequence-only estimate (linear, free termini)
6275.49 sequence-only estimate (linear, free termini)
12.95 sequence-only estimate (linear, free termini)
+18 sequence-only estimate (linear, free termini)
3.94 sequence-only estimate (linear, free termini)
-1.518 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA